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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901427.1_cds_XP_016451446.1_45797
CDS Infomation

[gene=LOC107776126] [db_xref=GeneID:107776126] [protein=aspartic proteinase Asp1-like] [protein_id=XP_016451446.1] [location=complement(join(17924..18012,18321..18393,18473..18667,18746..18884,18974..19207,19333..19559,19780..19897,21292..21470))] [gbkey=CDS]
Sequence

ATGAAAGGAAAATGGAAAGTACCTTTTTGGGTGCTATTGGCGTTGTACTGTCTACTTCTA
TCTCAGTCGTTTAAGGGTTGTTTTTCTGCCTTTAGTCTGCCTCGTCCCTCTTGGAAGAAA
CAGTCCAAGTTTGGTTCCTCTCTTGTTTTTCCTCTAGCTGGAAACGTGTATCCTAAAGGG
TATTATCAGGTGACAATCAATGTTGGCCAACCTCCCAAACCTTACTTTCTTGATATAGAC
ACTGGTAGTGATCTCACTTGGCTTCAGTGTGATGCACCTTGTGCCAAATGCGCTCCGGCT
CCTCACAGTCTGTACAAACCGAATAAAAATATTGTCAAGTGTAAGGATCCTGTATGTGCA
TCCCTTCACTTACCTGCAAACCATCACTGTCACACCCCTGACGAGCAATGCGACTATGAG
GTTGAGTATGCAGATCATGGTTCGTCGTTGGGAGTTCTGGTGAAAGACGCATTTCCACTA
AGATTCACCAATGGTAGCACCGTTTCACCTCCTCTAGTGTTTGGTTGTGGGTACAATCAA
GAAGTGCCAGCCTCTACTCCTGCACCTTTTACCGATGGAATTCTTGGTCTAGGAAATGGA
AAATCAAGCGTTCTATCACAGCTGAGTAGCTTGGGTCTTATCCGGCATGTAGTAGGTCAC
TGTCTAAGCGGGCAAGGTGGAGGTTTTCTTTTCTTTGGAGATGATGTCCTCCCGTCTTCT
GGGATTGTTTGGACACCTATTGTGCGTGCATCTTCAGAGAAACACTATTCTTTGGGACCT
GCAGATCTCCTATTCAGTGGGCAGGCAACTGGAATAAAGGGTATACCAATAATTTTTGAC
AGCGGAAGTACTTACAGTTACTTTAATTCTGACGCTTACAAAATTCTGGTGTCTTCGATT
AAGAAAGACATAAATACAAAGCAGCTGACCGAGGCAGTGGACGACAAAAGCTTACCTGTC
TGCTGGAAAGTCTCCAAAAGCTTCAAATCCATTCATGATGCCAAGAGCTACTTCAAGCCA
TTAACACTTAGTTTCACAAAAGCTAAAAATGTTCAGCTTCAACTGCCACCTGAGGCCTAT
CTTGTTCGAACTGAGCATGGCAATATATGCTTAGGCATATTGGATGGTTCTGAGGTTGGA
TTAGGAAATTATAATATCATTGGAGATATTTCTATGGTAGACAAAATGGTGATTTACGAC
AACGAGAAACAACAGATTGGTTGGGTTTCAGCAAACTGCAACAAGCTTCCATAG

Peptide Sequence

PEP ID

XP_016451446.1
PEP Infomation

PREDICTED: aspartic proteinase Asp1-like [Nicotiana tabacum]
Sequence

MKGKWKVPFWVLLALYCLLLSQSFKGCFSAFSLPRPSWKKQSKFGSSLVFPLAGNVYPKG
YYQVTINVGQPPKPYFLDIDTGSDLTWLQCDAPCAKCAPAPHSLYKPNKNIVKCKDPVCA
SLHLPANHHCHTPDEQCDYEVEYADHGSSLGVLVKDAFPLRFTNGSTVSPPLVFGCGYNQ
EVPASTPAPFTDGILGLGNGKSSVLSQLSSLGLIRHVVGHCLSGQGGGFLFFGDDVLPSS
GIVWTPIVRASSEKHYSLGPADLLFSGQATGIKGIPIIFDSGSTYSYFNSDAYKILVSSI
KKDINTKQLTEAVDDKSLPVCWKVSKSFKSIHDAKSYFKPLTLSFTKAKNVQLQLPPEAY
LVRTEHGNICLGILDGSEVGLGNYNIIGDISMVDKMVIYDNEKQQIGWVSANCNKLP

Transcript Sequence

Gene sequence data has not been registered.